Publications

Recommended

 * 1) Presentations from the 2013 Dryad Membership Meeting on May 25 in Oxford, UK
 * 2) Greenberg, J. The Dryad Repository. Long-term Stewardship of Scientific Data. American Library Association Annual Conference, Anaheim, CA, June 24, 2012. ([[Media:DryadD1-Greenberg.pdf|slides]])
 * 3) Piwowar, HA, Vision, TJ, & Whitlock, MC (2011). Data archiving is a good investment. Nature, 473 (7347), 285-285  doi: 10.1038/473285a
 * 4) Vision, TJ. (2010) Open Data and the Social Contract of Scientific Publishing. BioScience 60(5):330-330. doi:10.1525/bio.2010.60.5.2
 * 5) Vision, TJ. Coupling Research Data to Publications in the Life Sciences. ICSTI Delivering Data in Science workshop Paris, France, Mar. 5, 2012. ([[Media:VISION_PRESENTATION_V2.pdf|slides]])

Papers

 * 1) Greenberg J, Swauger S, Feinstein EM (2013) Metadata Capital in a Data Repository. Proceedings of the International Conference on Dublin Core and Metadata Applications 2013: 140-150. link
 * 2) Piwowar HA, Vision TJ. (2013) Data reuse and the open data citation advantage. PeerJ 1:e175 DOI:10.7717/peerj.175
 * 3) Willis C, Greenberg J, White H (2012). Analysis and Synthesis of Metadata Goals for Scientific Data, Journal of the American Society for Information Science and Technology (JASIST) 63, 1505–1520, doi:10.1002/asi.22683
 * 4) Piwowar HA, Vision TJ, Whitlock MC (2011) Data archiving is a good investment, Nature 473, 285. doi:10.1038/473285a
 * 5) Greenberg, J. Losee, R., Aguera, J., Scherle, R., White, H., and Willis, C. (2010). HIVE: Helping interdisciplinary vocabulary engineering, Bulletin of the American Society for Information Science and Technology 37(4).
 * 6) Greenberg, J. (2010). Metadata for Scientific Data: Historical Considerations, Current Practices, and Prospects, Journal of Library Metadata, 10(2/3): 75-78. doi:10.1080/19386389.2010.520262
 * 7) White, H. (2010) Considering Personal Organization: Metadata Practices of Scientists, Journal of Library Metadata, 10 (2/3). doi:10.1080/19386389.2010.506396
 * 8) Vision, T.J. (2010) Open Data and the Social Contract of Scientific Publishing, BioScience 60(5):330-330. doi:10.1525/bio.2010.60.5.2
 * 9) Greenberg, J., White, H., C, Carrier, C. and Scherle, R. (2009). A Metadata Best Practice for a Scientific Data Repository, Journal of Library Metadata 9, 194—212. doi:10.1080/19386380903405090, [[Media:DryadBestPracticeJLM.pdf|preprint]].
 * 10) Greenberg, J. (2009). Theoretical Considerations of Lifecycle Modeling: An Analysis of the Dryad Repository Demonstrating Automatic Metadata Propagation, Inheritance, and Value System Adoption, Cataloging and Classification Quarterly 47, 380-402, doi:10.1080/01639370902737547, [[Media:DyadCCQ.pdf|preprint]], winner of the 2010 Jesse H. Shera Award for Distinguished Published Research.

Conference Papers

 * 1) Scherle, R. (2013) Integrating Your Repository With the DataONE Network. International Conference on Open Repositories. Paper (PDF)
 * 2) Scherle, R., &amp; Diggory, M. (2012) Creating Citable Data Identifiers. International Conference on Open Repositories. Paper (PDF), Slides (PPT), Video
 * 3) Michener et al. (2011) DataONE: Data Observation Network for Earth — Preserving Data and Enabling Innovation in the Biological and Environmental Sciences, D-Lib Magazine 17(1/2), from a presentation at the DataCite Summer Meeting, Hanover, Germany, 7-8 June 2010
 * 4) Vision TJ. The Dryad Digital Repository: Published evolutionary data as part of the greater data ecosystem. iEvoBio, Portland OR, June 2010.
 * 5) Beagrie, N., Eakin-Richards, L., and Vision, T. [[Media:IPRES2010_Paper37.pdf|Business Models and Cost Estimation: Dryad Repository Case Study]], iPRES2010 Vienna, September 2010.
 * 6) Pérez-Agüera, J., Arroyo, J., Greenberg, J., Perez-Iglesias, J., and Fresno, V. Using BM25F for Semantic Search. Semantic Search Workshop at the 19th Int. World Wide Web Conference WWW2010 April 26, 2010, Raleigh, NC, USA..  10.1145/1863879.1863881.  SEMSEARCH '10 Best Paper Award (PDF)
 * 7) Greenberg, J. (2009). Theories of Evolution and Cultural Diffusion: The Dryad Repository Case Study for Understanding Changes in Organizing Information Practices. iSchool Conference, Chapel Hill, NC, February 9, 2009. ([[Media:ReviSchool-2009.doc|Paper in Word format]])
 * 8) White, H. Carrier, S., Thompson, A., Greenberg, J., &amp; Scherle, R. (2008) The Dryad Data Repository: A Singapore Framework Metadata Architecture in a DSpace Environment. In DC 2008, the 2008 International Conference on Dublin Core and Metadata Applications, Berlin. ([[Media:DC2008SingaporeFramework.pdf|PDF]])
 * 9) Carrier, S., Dube, J., &amp; Greenberg, J. (2007). The DRIADE Project: Phased Application Profile Development in Support of Open Science. In DC-2007: Application Profiles: Theory and Practice. International Conference on Dublin Core and Metadata Applications, Singapore, August 27-31, 2007, pp. 35-42. ([[Media:DC2007_DRIADE_paper.pdf|PDF]])

Posters

 * 1) White, H., Willis, C., Greenberg, J. (2012) The HIVE impact: contributing to consistency via automatic indexing. iConference 2012. Toronto, ON, Canada. [[Media:Hive_poster_iconference_2012.pdf‎|Poster]]
 * 2) Greenberg, J., Lapp, H., Scherle, R., Vision, T., White, H., Carrier, S., and Schaeffer, P. (2009)  The Dryad Repository: Designing a Curation Workflow.  5th International Digital Curation Conference, London, UK. December 2009.  ([[Media:DryadIDCC5_DRAFT.pdf|Abstract]], and [[Media:poster_final.pdf|Poster]])
 * 3) Scherle, R., Bapat, A., Carrier, S., Greenberg, J., Lapp, H., Schaeffer, P., Vision, T., & White, H. (2009) Dryad: a digital repository of data from publications in evolutionary biology and ecology. In Evolution 2009, Moscow, Idaho. ([[Media:2009-6-evolutionPoster.ppt‎|Poster PPT]])
 * 4) Scherle, R., Lapp, H., Bapat, A., Carrier, S., Greenberg, J., Schaeffer, P., Vision, T., & White, H. (2009) The Dryad Data Repository. In the 2009 The International Conference on Biodiversity Informatics, London. ([[Media:EBiospherePosterAbstract2009.txt|Abstract]], [[Media:2009-6-eBiosphere-Poster.ppt|Poster PPT]], [[Media:2009-6-eBiosphere-Poster.pdf|Poster PDF]])
 * 5) White, H. (2008) Exploring Evolutionary Biologists' Use and Perceptions of Semantic Metadata for Data Curation. In DC 2008, the 2008 International Conference on Dublin Core and Metadata Applications, Berlin. ([[Media:Hollie's_DC_poster_abstract.doc|Abstract]], [[Media:HollieDC2008.pdf|Poster]])
 * 6) Scherle, R., Carrier, S., Greenberg, J., Lapp, H., Thompson, A., Vision, T., & White, H.  (2008) Building Support for a Discipline-Based Data Repository. In Proceedings of the 2008 International Conference on Open Repositories. ([[Media:buildingSupport-OR2008.pdf|Extended Abstract]], [[Media:BuildingSupportPoster.pdf|Poster PDF]], [[Media:BuildingSupportPoster.ppt|Poster PPT]])
 * 7)  Dube, J., Carrier, S., & Greenberg, J. (2007) DRIADE: A Data Repository for Evolutionary Biology.  In Proceedings of the 2007 Joint Conference on Digital Libraries. p.481, ACM Press, Vancouver, BC, Canada. ([[Media:Dube et al JCDL2007.pdf|Abstract]], [[Media:Poster-final.ppt|Poster PPT]])
 * 8)  Carrier, S., Dube, J. Greenberg, J., Lapp, H., Thompson, H., Vision, T., & White, H. (2007) The Dryad Repository: Transforming Scientific Publishing and Data Discovery Via the Convergence of Open Access and eScience.  The 2007 Microsoft eScience Workshop at RENCI, Chapel Hill, USA, 21-23 Oct 2007. ([[Media:UNC_Dryad_finalAbstract_rev.doc|Abstract]], [[Media:Escience_poster.pdf‎|Poster]])
 * 9) José R. Pérez-Agüera, Javier Arroyo, Jane Greenberg, Joaquin Perez-Iglesias and Victor Fresno. INEX+DBPEDIA: A corpus for Semantic Search Evaluation. at the 19th Int. World Wide Web Conference WWW2010 April 26, 2010, Raleigh, NC, USA.

Presentations

 * 1) Scherle, R. &amp; Vision, T. (2013) Dryad: Data as an Integral Part of the Scholarly Record. DataONE Users Group.
 * 2) Schaeffer, P. Supporting scientific communities by publishing data. Joint OpenAIRE/LIBER workshop ‘Dealing with Data - what’s the role for the library?’, Ghent (Belgium), 28 May 2013. ([[Media:OpenAire.pptx|PPT slides]])
 * 3) Cranston, K. Freeing scientific data with CC0 and Dryad repository. Opensourceway. April 12, 2013. (video)
 * 4) Scherle, R. Dryad Curation Process. CurateGear Symposium. Chapel Hill, NC, January 9, 2013. ([[Media:2013-1-CurateGear.pptx|PPT slides]])
 * 5) Scherle, R. Dryad and Data Citation. ANDS Data Citation Webinar Series. September 26, 2012. (video, [[Media:2012-9-ANDSDryadCitations.pptx‎|PPT slides]])
 * 6) Greenberg, J. Dryad’s Evolving Proof of Concept and the Metadata Hook. Wolfram Data Summit, Washington DC, September 6, 2012 ([[Media:Dryad-Wolfram-JaneGreenberg.pdf|slides]])
 * 7) Greenberg, J. The Dryad Repository. Long-term Stewardship of Scientific Data: Your Library Can Participate in DataONE. LITA Session, ALA Annual Conference, Anaheim, CA, June 24, 2012. ([[Media:DryadD1-Greenberg.pdf|slides]])
 * 8) Luyten, B., Diggory, M., Schaeffer, P. Subject Repositories for Research Data - the Dryad Approach., European Library Automation Group (ELAG) Annual Conference, Mallorca, Spain, May 16, 2012. ([[Media:ELAG-DRYAD-ATMIRE-FINAL.pdf|slides]])
 * 9) Fitzgerald, R., Dechman, L., Willis, C. (2012). HIVE for LC Web Archives: Web Archives and Automatic Subject Indexing. Presentation given at the International Internet Preservation Consortium 2012 General Assembly, Washington, DC. May 4, 2012. ([[Media:Iipcpresentation.pdf|slides]])
 * 10) Schaeffer, P. Creating a sustainable business model for a digital repository: the Dryad experience. Research Data Access & Preservation Summit 2012, New Orleans, LA, Mar. 22, 2012. ([[Media:RDAP4.pdf|slides]], video)
 * 11) Greenberg, J. Digital Libraries for Research Data. Conferencia Inaugural del Segundo Cuatrimestre, Dpto. de Biblioteconomía y Documentación, Campus de Colmenarejo, Universidad Carlos III de Madrid, Spain, February 13, 2012. ([[Media:DryadGreenbergUC3M.pdf|slides]])
 * 12) Vision, T.J. Coupling Research Data to Publications in the Life Sciences. ICSTI Delivering Data in Science workshop Paris, France, Mar. 5, 2012. ([[Media:VISION_PRESENTATION_V2.pdf|slides]])
 * 13) Vision, T. J. Dryad: Scalable Infrastructure for coupling Research Data to Publications in the Life Sciences (video), Academic Publishing in Europe 2012 Berlin, Germany, Jan. 25, 2012.
 * 14) Greenberg, J. The Dryad Repository. Repositories in Science &amp; Technology: Preserving Access to the Record of Science, CENDI and NFAIS and Hosted by FLICC Library of Congress, November 30, 2011 ([[Media:GreenbergDryadCENDIetcNov30.pdf|slides]]).
 * 15) Greenberg J. Beyond Zebra: Taking RDA Beyond MARC; Dublin Core: A Stepping Stone for the Dryad Repository. ALA Annual Conference, June 24-27, 2011 ([[Media:GreenbergALA-2011.pdf|slides]])
 * 16) Greenberg J. NASKO, Toronto, June 16-17, 2011 ([[Media:GreenbergNASKO.pdf|slides]])
 * 17) Piwowar H, iDASH seminar, UC San Diego, June 17th, 2011.
 * 18) Greenberg J, "Metadata Research: Evolution of a Discipline", Drexel University iSchool, May 9, 2011, abstract
 * 19) Greenberg J and Vision T, "The Dryad Repository: A New Path for Data Publication in Scholarly Communication", OCLC, April 25, 2011, recorded presentation
 * 20) Vision T. Introduction to DryadUK sustainability workshop. April 1 2011, The British Library, London UK. [[Media:Vision.dryaduk.april2011.pptx|slides]]
 * 21) Clarke, K. Sharing Between Data Repositories. Code4Lib 2011 Conference, Feb. 2011. Bloomington, IN. ([[Media:Ksclarke-c4l11.pdf|slides]], video -- go to 153 min)
 * 22) Shotton, D., Peroni, S. Semantic annotation of publication entities using the SPAR (Semantic Publishing and Referencing) Ontologies. Beyond the PDF Workshop, Jan. 2011, La Jolla, CA. ([[Media:2011-01Shotton%26Peroni_Semantic_Annotation_Using_SPAR_Ontologies.pdf|slides]])
 * 23) Vision, T., Scherle, R. The Dryad Digital Data Repository: Coupling the Publication of Scientific Articles and Data. International Digital Curation Conference, December 2010, Chicago, IL. ([[Media:2010-12-dryadIDCC.pdf|PDF abstract]])
 * 24) Greenberg, J, Data Curation Research Summit: Panel on Current Directions in Research: Projects and Perspectives, December 2010, Chicago, IL ([[Media:GreenbergDataCurationSummit.pdf|slides]])
 * 25) Greenberg, J, Willis, C., and White, H. Metadata for Scientific Data: An Analysis Targeting Challenges and Opportunity in Our Global Information Ecology, CODATA, Cape Town, South Africa, October, 2010, ([[Media:GreenbergCODATA.pdf|slides]])
 * 26) Vison, T., Lapp, H. The Dryad Digital Repository: published data as part of the greater data ecosystem. ISMB 2010, Boston MA, July 2010. ([[Media:Lapp_ISMB2010.pdf|PDF]])
 * 27) Whitlock, M. Data Archiving in Evolutionary Biology. Evolution 2010, Portland, OR. ([[Media:SSE_Data_Archiving_Whitlock.ppt|PPT]])
 * 28) Neil Beagrie, Dryad and the sustainability of digital repositories (no abstract available), Fourth Bloomsbury Conference on e-publishing, London UK, June 2010.
 * 29) Michener, W., Kunze, J., Cruse, P., and Scherle, R. The Dryad and DataONE project in the US. DataCite Summer Meeting, Hanover Germany, May 2010. ([[Media:2010-6-DataCiteMeetingFinal.ppt|PPT]], Video of Presentation)
 * 30) Scherle, R. and Aguera, J. HIVE: A New Tool for Working With Vocabularies. Code4Lib conference, Asheville, NC, February 2010. ([[Media:2010-2-code4lib-HIVE.ppt|PPT]])
 * 31) Scherle, R. (2009). The Dryad Data Repository. Duke Repository Community, July 2009. ([[Media:2009-7-RepoCom.ppt|PPT]])
 * 32) Scherle, R. (2009). Using DSpace as a Disciplinary Data Repository. International Conference on Open Repositories 2009, Atlanta, GA. (Presentation files and a video of the presentation are available at http://hdl.handle.net/1853/28409).
 * 33) Greenberg, J. (2009). Metadata Research Supporting the Dryad Data Repository. Metadata Working Group Forum. Cornell University Library (Abstract,[[Media:DryadCornell.pdf|PDF Slides]])
 * 34) Vision, Todd J. (2009). Scientific Publications, Scientific Data, and the Role of Domain-specific Digital Libraries. UNC Scholarly Communications Working Group. ([[Media:Scholarly_communications_apr09.pdf|PDF Slides]])
 * 35) Greenberg, J., Carrier, S., White, H., and Scherle, R. (2009). The Dryad Repository Application Profile: Groundwork Towards a Metadata Scheme for Scientific Data. DigCCurr2009, Chapel Hill, NC, April 2, 2009. ([[Media:2DigCCurr.ppt|PPT]])
 * 36) Greenberg, J. (2009). Theories of Evolution and Cultural Diffusion: The Dryad Repository Case Study for Understanding Changes in Organizing Information Practices. iSchool Conference, Chapel Hill, NC, February 9, 2009. ([[Media:ISchool.ppt|PPT]])
 * 37) Greenberg, J. (2008). The DRYAD Repository: Metadata Research and Development. Library of Congress, December 19, 2008. ([[Media:DryadLC.pdf|PDF Slides]])
 * 38) Greenberg, J. (2007). Classifying Scientific Data Objects with Bibliographic Relationship Taxonomies. ASIS&amp;T 2007 Annual Meeting, Oct 2007. ([[Media:ASIST_2007.ppt|PPT]])
 * 39) Greenberg, J. (2007). Consensus Building and Prioritizing Consensus Building and Prioritizing &lt;Metadata&gt; Development for Project DRIADE: A Case Study. DigCCurr 2007, Chapel Hill, NC, April 18, 2007. ([[Media:Greenberg_slides_4-3.pdf|PDF Slides]])

Grants

 * 1) Dryad-UK project: for greater international expansion of Dryad. PI: David Shotton. JISC. Funded for 1 year, starting 2010-10-1. ([[Media:DryadUKNarrative.pdf|Dryad-UK project proposal]])
 * 2) DataONE project: for cross-respository collaboration. PI: William Michener. NSF DataNet DBI-0753138. Funded for 5 years, starting 2009-8-1. (DataONE web site)
 * 3) HIVE project: for enhanced controlled vocabulary features. PI: Jane Greenberg. IMLS LG-07-08-120-08. Funded for 2.5 years, starting 2009-1-1. ([[Media:Narrative.pdf|HIVE project proposal]])
 * 4) Dryad development project for general Dryad phase 2 development. PI: Kathleen Smith, Todd Vision. NSF DBI-0743720. Funded for 4 years, starting 2008-9-15.([[Media:Dryad.proj.descr.07.pdf|Dryad project proposal]])
 * 5) Virtual Data Center project: for cross-repository collaboration. PI: William Michener. NSF INTEROP DBI-0753138. Funded for 4 years, starting 2008-7-15. (VDC project abstract)

Other

 * 1) Beagrie, N. et al. (April 2010). [[Media:Beagrie_suppdata_report_apr10.pdf | Dryad Sustainability Plan: interview survey findings.]] Report on journal practices and costs for supplementary materials, esp. data.
 * 2) Greenberg, J.  (2009, in press).  Metadata and Digital Information.  In Marcia J. Bates, Mary Niles Maack, Miriam Drake eds. Encyclopedia of Library and Information Science, New York: Marcel Dekker, Inc. ([[Media:Metadata_ELIS.pdf|PDF]])
 * 3) Carrier, S. (2008). The Dryad Repository Application Profile: Process, Development, and Refinement (Master’s Paper, UNC Chapel Hill, 2008). DOI: http://hdl.handle.net/1901/534.
 * 4) Vision, T., Lapp, H., and Greenberg, J. (2007). Final Report from the [[Media:Workshop2007FinalReport.pdf|Dryad Stakeholder's Workshop]].