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Data from: Echinoderm phylogeny including Xyloplax, a progenetic asteroid

When using this data, please cite the original article:

Janies DA, Voight JR, Daly M (2011) Echinoderm phylogeny including Xyloplax, a progenetic asteroid. Systematic Biology 60(4): 420-438. doi:10.1093/sysbio/syr044

Additionally, please cite the Dryad data package:

Janies DA, Voight JR, Daly M (2011) Data from: Echinoderm phylogeny including Xyloplax, a progenetic asteroid. Dryad Digital Repository. doi:10.5061/dryad.1926
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Dryad Package Identifier doi:10.5061/dryad.1926    671 views  
Abstract Reconstruction of the phylogeny of the five extant classes of the phylum Echinodermata has proven difficult. Results concerning higher-level taxonomic relationships among echinoderms are sensitive to the choice of analytical parameters and methods. Moreover, the proposal of a putative sixth class based on a small, enigmatic disc-shaped echinoderm, Xyloplax, from the deep seas of the Bahamas and New Zealand in the 1980s further complicated the problem. Although clearly an echinoderm, Xyloplax did not have clear affinity among known groups. Using molecular sequence and developmental data from recently collected Xyloplax adults and embryos we show that, rather than representing an ancient, distinct lineage as implied by its status as a class, Xyloplax is simply a starfish that is closely related to the asteroid family Pterasteridae. Many members of the Pterasteridae and all Xyloplax inhabit deep and polar seas and brood young. Brooding pterasterids and Xyloplax hold their young in specialized adult chambers until the young reach an advanced juvenile stage and are released as free-living individuals. We hypothesize that the unique morphology of Xyloplax evolved via progenesis - the truncation of somatic growth at a juvenile body plan but with gonadal growth to maturity. Although the overall phylogeny of extant echinoderms remains sensitive to choice of analytical methods, the placement of Xyloplax as sister to pterasterid asteroids is unequivocal. Based on this, we argue that the proposed class and infraclass status of Xyloplax should be suppressed.
Keywords Echinoderms, Xyloplax, Phylogeny, Asteroids, Evolution of Development,
Date Deposited 2010-08-31T17:07:21Z
Scientific Names Ciona intestinalis
Acodontaster conspicuus
Allostichaster sp
Amblypneustes ovum
Amphipholis squamata
Arbacia lixula
Arbacia punctulata
Archaster typicus
Asterias forbesi
Asterina miniata
Asteronyx sp
Diplodontias miliaris
Astropecten articulatus
Astropecten polyacanthus
Brisingaster robillardi
Caymanostella sp
Cephalodiscus gracilis
Chiridota rotifera
Coscinasterias muricata
Crossaster papposus
Cucumaria miniata
Cucumaria salma
Dermasterias imbricata
Diplasterias brucei
Echinaster sentus
Echinocardium cordatum
Echinus esculentus
Encope aberrans
Eucidaris tribuloides
Eurygonias hylacanthus
Evasterias troschelii
Florometra serratissima
Genocidaris maculata
Gorgonocephalus eucnemis
Gymnocrinus richeri
Harriamania planktophilus
Heliaster helianthoides
Henricia sp
Holopneustes inflatus
Holothuria leucospilota
Hymenaster pellucidus
Leptasterias hexactis
Leptosynapta clarkii
Luidia clathrata
Luidia foliolata
Macroptychaster accrescens
Meoma ventricosa
Mespilia globulus
Metacrinus rotundus
Odontaster validus
Ophiocanops fugiens
Ophiocoma echinata
Ophioderma brevispinum
Ophiomyxa flaccida
Ophionereis reticulata
Ophiopholis aculeata
Ophiopsammus maculata
Ophiothrix oerstedii
Paracentrotus lividus
Parastichopus californicus
Patiriella regularis
Pentacta pygmaea
Perknaster fuscus
Pisaster ochraceus
Psammechinus miliaris
Pseudarchaster pareli
Pseudechinus albocinctus
Pseudostichopus villosus
Psychropotes longicauda
Pteraster tesselatus
Ptychodera flava
Rathbunaster californicus
Saccoglossus kowalevskii
Salmaciella oligopora
Salmacis belli
Schizostella bifurcata
Solaster stimpsonii
Sphaerechinus granularis
Stegnaster inflatus
Stichaster australis
Stomopneustes variolaris
Strongylocentrotus purpuratus
Temnopleurus alexandri
Temnotrema sculptum
Tripneustes gratilla
Xyloplax janetae
Spatial Coverage World's Oceans
Temporal Coverage Ordovician to present
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18S rDNA segment
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18S.reg2.1.addpm2.compress    57 views   34 downloads View File Details
18S rDNA segment
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18S.reg2.2.may4cos.compress    54 views   39 downloads View File Details
18S rDNA segment
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28.0.may4.compress    55 views   31 downloads View File Details
28S rDNA segment
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28.1.1.dec24.compress    46 views   39 downloads View File Details
28S rDNA segment
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28.1.2.dec24.compress    53 views   32 downloads View File Details
28S rDNA segment
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28S.3.1.dec24.compress    47 views   27 downloads View File Details
28S rDNA segment
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28S.3.2.may4.compress    43 views   32 downloads View File Details
28S rDNA segment
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28S.3.3.may4.compress    42 views   26 downloads View File Details
28S rDNA segment
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28S.3.4.may4.compress    39 views   33 downloads View File Details
28S rDNA segment
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28S.3.5.may4.compress    43 views   39 downloads View File Details
28S rDNA segment
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28.4.jan2.compress    55 views   32 downloads View File Details
28S rDNA segment
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S12.june16.compress    48 views   33 downloads View File Details
12S rDNA segment
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S16.addmyx.compress    51 views   44 downloads View File Details
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trnar2.may4.compress.fixapril    47 views   34 downloads View File Details
DNA coding for mt tRNA segment
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trnar3.may4.compress    49 views   37 downloads View File Details
DNA coding for mt tRNA segment
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trnar4.may4.compress    64 views   42 downloads View File Details
DNA coding for mt tRNA segment
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coi.may4.compress    45 views   40 downloads View File Details
DNA coding for cytochrome oxidase from mt
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H3.june16.prealined    55 views   34 downloads View File Details
DNA coding for Histone H3
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terminalsfile86    47 views   41 downloads View File Details
terminals file for poy analysis
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accessionsfinal    68 views   58 downloads View File Details
Genbank accessions for DNA segments
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pheno8636charafinal    53 views   52 downloads View File Details
annotated phenotype character matrix (tnt format)
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primers    70 views   39 downloads View File Details
primers used in study
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POY tree    32 views   30 downloads View File Details
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NEXUS file based on phenotypic data and implied alignment of molecular data    33 views   24 downloads View File Details
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CON tree from MRBAYES search on implied alignment and phenotypic data    23 views   32 downloads View File Details
note used dendroscope to view
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NEXUS file based on implied alignment of molecuar data    20 views   35 downloads View File Details
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MAP tree from MRBAYES search on implied alignment    19 views   27 downloads View File Details
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CON tree from MRBAYES search on implied alignment and phenotypic data    25 views   35 downloads View File Details
note used dendroscope to view
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NEXUS file based on phenotypic data and clustalw alignment of molecular data    26 views   21 downloads View File Details
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MAP tree from MRBAYES search on phenotypic data and clustalw alignment of molecular data    27 views   15 downloads View File Details
Download: taxa8611005mb.morphfix.nex.map.zip ( 2.683Kb )
Download: README.txt ( 4.036Kb )
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CON tree from MRBAYES search on phenotypic data and clustalw alignment of molecular data    19 views   23 downloads View File Details
note used dendroscope to view
Download: taxa8611005mb.morphfix.nex.con ( 7.48Kb )
Download: README.txt ( 4.036Kb )
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NEXUS file based on clustalw alignment of molecular data    37 views   34 downloads View File Details
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CON tree from MRBAYES search on clustalw alignment of molecular data    20 views   28 downloads View File Details
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Download: README.txt ( 4.036Kb )
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MAP tree from MRBAYES search on clustalw alignment of molecular data    26 views   24 downloads View File Details
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